PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715248.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 453aa MW: 50059 Da PI: 10.3168

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.8	2.8e-09	339	387	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_022715248.1 339 AWTLSEVMKLVEGVSKYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 387 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MEGGSSTSAG YISSKPDFSK LKGEICLDNL SIKELHEVFK ATFGRDTTVK DKQWLKRRIA 60 MGLTNSCDVS TTTFVIKDNK LVKEGKEDSS NNVNLPTGKE YPAASIEYHV DLLNSHGSQI 120 DELQTTSGTR LGNNGVENNY ASEDLAADQR AAKRVRKPTK RYIEELSEAE SKEYSGRFIT 180 STRNIGIRHL TSKSHVRPAR NLSLEGRTVI MRLDSLGGSG IRVPCVCRVR RSRPRKNVMA 240 LLKFHPSGMG MTATFVRKDL DIRSSLIDNG SVNKLLEVKS SPEETPQQFV TESKKEKPSA 300 ELGRNMGLKY VDPSGYTSDD NVATVPTAKG GTRRKHHRAW TLSEVMKLVE GVSKYGAGRW 360 SEIKRLAFAS YSYRTSVDLK DKWRNLLKAS FALTPADKGV NSRKHPSMPI PAPILLRVRE 420 LAEMQAQVPA PNPSASKLAA CGGSVNEPRL GYL

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MEGGSSTSAG YISSKPDFSK LKGEICLDNL SIKELHEVFK ATFGRDTTVK DKQWLKRRIA  60
MGLTNSCDVS TTTFVIKDNK LVKEGKEDSS NNVNLPTGKE YPAASIEYHV DLLNSHGSQI  120
DELQTTSGTR LGNNGVENNY ASEDLAADQR AAKRVRKPTK RYIEELSEAE SKEYSGRFIT  180
STRNIGIRHL TSKSHVRPAR NLSLEGRTVI MRLDSLGGSG IRVPCVCRVR RSRPRKNVMA  240
LLKFHPSGMG MTATFVRKDL DIRSSLIDNG SVNKLLEVKS SPEETPQQFV TESKKEKPSA  300
ELGRNMGLKY VDPSGYTSDD NVATVPTAKG GTRRKHHRAW TLSEVMKLVE GVSKYGAGRW  360
SEIKRLAFAS YSYRTSVDLK DKWRNLLKAS FALTPADKGV NSRKHPSMPI PAPILLRVRE  420
LAEMQAQVPA PNPSASKLAA CGGSVNEPRL GYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	236	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-117	MYB_related family protein