PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715268.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 281aa    MW: 32114.8 Da    PI: 4.9951
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.94.7e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed++l+d+vk +G g+W+  +++ g++R++k+c++rw++yl
   XP_022715268.1 14 RGAWTAMEDKILADYVKIHGEGQWRNLPKRAGLKRCGKSCRLRWLNYL 61
                     89********************************************97 PP
2Myb_DNA-binding54.33.1e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++
   XP_022715268.1  67 RGNITPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110
                      7999******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGRSPCCSKE GLNRGAWTAM EDKILADYVK IHGEGQWRNL PKRAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI TPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NISKKLQGQQ  120
SHSLSNRKPQ PSQANSNSCV IRTKATRCTK VFLNRPEPEL EDTKPSLLRP SSLSEELESS  180
EYVPKEDNDP SNFMIDLEVD ENFLSEFLLN SEFSQLQPSH FQNKGDSYSN SDTCEQGQYS  240
STNSDQSLVF SDDMMQDVDF SSLASLMESE LDWLEDQADP N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.12e-67MYB family protein