PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715478.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 909aa    MW: 100472 Da    PI: 6.4758
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.84.1e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+         +++++  +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_022715478.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsLLPPAQ--ELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************96555555..8************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_022715478.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp120.51.3e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFvv+++k+ ka + ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_022715478.1 253 AAHAAATNSRFTIFYNPRASPSEFVVPLAKYIKAAYnTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79*****************************99877599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 909 aa     Download sequence    
MKLSSAGFNP QSQEGEKRVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMMLQ PLSPQEQKEA YLPVELGTPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSL LPPAQELIAR DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVVPL AKYIKAAYNT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFA LRLKRPWPPG LPSFHGIKDN DLGMNSPLLW LRGDADGGMQ SLNVQGIGVT  420
PWMQPRMDAS IPGLQPDMYQ AMAAAALQEM RAMDPSKAAT ASLLQFQQPQ NLPYRPAVLM  480
QPQMLQQSQP QAFLQGVEDN QHQSQXAQAQ AQTQPHILQQ QLQHQNSFNN QQQHQHQQQL  540
QHPLSQQHQQ LVDHQQISSA VSAMSQYASA SQSQSSPLQA IPSLCQQRSF SDSNVNPVTS  600
PIVSPLHSLL GSFPQDESSN LLNFPRSNPV LTPAAWPSKR AAVQLLSSGS PQCVMPQVEQ  660
LGPVQTNTSQ NSILLPPFPG KECSIDQEGG TDPQSHLLFG VNIDQPSSLL MQNGMSSLRG  720
IGSDSDSATI SFSSNYMSTA GAEFSINTAM TPSSYIDESG ILQSPENVGQ GNPQTRTFVK  780
VYKSGSFGRS LDISKFSSYN ELRSELARMF GLEGLLEDPL RSGWQLVFVD RENDVLLLGD  840
DPWPEFVNSV WCIKILSPQE VQQMGKQGLE LLNSVPVQRL SNGGCDDYVS RQESRNLSSG  900
IASVGSLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein