PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715693.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27952.8 Da    PI: 10.129
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.31.5e-312473150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  XP_022715693.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 73
                    79***********************************************8 PP
2K-box115.93.8e-38911883100
           K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +s++ s++ea+a+ +qqe++kL+++i+nLq+++Rh+lGe+L  L +keL+ Le++Lek++++iRskKnell+++ie++qk+e +l+++n+ Lr+k
  XP_022715693.1  91 SSNTGSVSEANAQFYQQEADKLRNQIRNLQKTNRHMLGESLVGLPMKELRGLETRLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQLLRAK 185
                     3444459**************************************************************************************** PP

           K-box  98 lee 100
                     ++e
  XP_022715693.1 186 IAE 188
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MVYPNESHEN SPQKKMGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL  60
IVFSSRGRLY EYANNSVKRT IERYKKASSD SSNTGSVSEA NAQFYQQEAD KLRNQIRNLQ  120
KTNRHMLGES LVGLPMKELR GLETRLEKGI SRIRSKKNEL LFAEIEYMQK REIDLHNNNQ  180
LLRAKIAENE KRQQNMNLMP GGSNFDVMHS QPFDSRNYFQ VNALQPANHY PEQDPMALQL  240
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.11e-124MIKC_MADS family protein