PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715827.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 412aa MW: 44640.8 Da PI: 6.0501

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	7.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+ +++++G g W++ +++ g++R++k+c++rw +yl XP_022715827.1 14 RGAWTAEEDQKLIAYIQKHGEGGWRSLPKKAGLRRCGKSCRLRWVNYL 61 89********************************************97 PP
2	Myb_DNA-binding	47.1	5.6e-15	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T +E + ++++++ lG++ W++Iar++ +Rt++++k++w+ + XP_022715827.1 67 RGDFTSDEAQTIIELHAALGNR-WAAIARHLR-KRTDNEIKNYWNAH 111 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MGRIPLCSAD GLKRGAWTAE EDQKLIAYIQ KHGEGGWRSL PKKAGLRRCG KSCRLRWVNY 60 LRPGVKRGDF TSDEAQTIIE LHAALGNRWA AIARHLRKRT DNEIKNYWNA HLKKRLVNLG 120 IDPVTHKPVG TARGTSSSEN CNTTVVNTDS MIILEENATS KESEPTSQQP TSSRSASASA 180 LLLNKLATRV TTLQCVDLDP VRACQRLQTM SFNSTTSDGG ANSESSTATI CHPTPSCQGN 240 NASIALDTSD YWPDNISDPL TTPLNCLDLL NIVLSPVSAD HGNAGDDGGV SFDANIEYPD 300 LSDALSILEG NASEPARSCS STSSRVLNNM ASKFASLRCI GELHNWQNRN TIPPGPIQGD 360 HSVTKTTIGD GGLSTNDINI DDMIFDTVGS PVFYNPNYLE NELVPSNLFD IP

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MGRIPLCSAD GLKRGAWTAE EDQKLIAYIQ KHGEGGWRSL PKKAGLRRCG KSCRLRWVNY  60
LRPGVKRGDF TSDEAQTIIE LHAALGNRWA AIARHLRKRT DNEIKNYWNA HLKKRLVNLG  120
IDPVTHKPVG TARGTSSSEN CNTTVVNTDS MIILEENATS KESEPTSQQP TSSRSASASA  180
LLLNKLATRV TTLQCVDLDP VRACQRLQTM SFNSTTSDGG ANSESSTATI CHPTPSCQGN  240
NASIALDTSD YWPDNISDPL TTPLNCLDLL NIVLSPVSAD HGNAGDDGGV SFDANIEYPD  300
LSDALSILEG NASEPARSCS STSSRVLNNM ASKFASLRCI GELHNWQNRN TIPPGPIQGD  360
HSVTKTTIGD GGLSTNDINI DDMIFDTVGS PVFYNPNYLE NELVPSNLFD IP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61420.2	3e-71	MYB family protein