PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715838.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 403aa MW: 43625.5 Da PI: 4.9975

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.6e-11	14	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+ +++++G g g++R++k+c++rw +yl XP_022715838.1 14 RGAWTAEEDQKLIAYIQKHGEG---------GLRRCGKSCRLRWVNYL 52 89******************.........889**********97 PP
2	Myb_DNA-binding	49.4	1e-15	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T +E + ++++++ lG++ W++Iar+++ +Rt++++k++w+ + XP_022715838.1 58 RGDFTSDEAQTIIELHAALGNR-WAAIARHLP-KRTDNEIKNYWNAH 102 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MGRIPLCSAD GLKRGAWTAE EDQKLIAYIQ KHGEGGLRRC GKSCRLRWVN YLRPGVKRGD 60 FTSDEAQTII ELHAALGNRW AAIARHLPKR TDNEIKNYWN AHLKKRLVNL GIDPVTHKPV 120 GTARGTSSSE NSSTTVVNTD SMIILEENAT SKESEPTSQQ PTSSRSASAS ALLLNKLATR 180 VTTLQCVDLD PVRACQRLQT MSFNSTTNDG GANSESSTAT ICHPTSSCEG NNASIALDTS 240 DYWPVNISDP LTTPLNCLDL LNIVLSPVSA DHGNAGEEGG VSFDANIEYP DLSDALSILE 300 GNASEPARSC SSTSSRVLNN MASKFASSRC IDELYNWQNR NNISPGPIQG DHSVTTTTIG 360 DGGLSTNDIN IDDMIFDTVG SPVFYNPIYL ENELVPSNLF YIP

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MGRIPLCSAD GLKRGAWTAE EDQKLIAYIQ KHGEGGLRRC GKSCRLRWVN YLRPGVKRGD  60
FTSDEAQTII ELHAALGNRW AAIARHLPKR TDNEIKNYWN AHLKKRLVNL GIDPVTHKPV  120
GTARGTSSSE NSSTTVVNTD SMIILEENAT SKESEPTSQQ PTSSRSASAS ALLLNKLATR  180
VTTLQCVDLD PVRACQRLQT MSFNSTTNDG GANSESSTAT ICHPTSSCEG NNASIALDTS  240
DYWPVNISDP LTTPLNCLDL LNIVLSPVSA DHGNAGEEGG VSFDANIEYP DLSDALSILE  300
GNASEPARSC SSTSSRVLNN MASKFASSRC IDELYNWQNR NNISPGPIQG DHSVTTTTIG  360
DGGLSTNDIN IDDMIFDTVG SPVFYNPIYL ENELVPSNLF YIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61420.2	3e-62	MYB family protein