PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715948.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 470aa MW: 52351.9 Da PI: 10.1916

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.4e-07	4	37	2	36
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRt 36 rW t+E++ll a+ ++G+++W+++a+++ +Rt XP_022715948.1 4 ERWGTWEELLLGGAILRHGTRDWNLVASELR-TRT 37 69***************************.9 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MITERWGTWE ELLLGGAILR HGTRDWNLVA SELRTRTVSP FAFTPEVCKA KYEDLQCRYS 60 GCKAWFEELR KQRMAELRQA LEQSEDSIGS LESKLESLKA EKTDYSRVDY DSSQTESALP 120 CHKSEGVEFS SKNTYKDGLS AGSFTQEAET IWAPDFQIPA AVPTEMDSKP GGDSLTSEGE 180 KISSIDKLAY TFSGGQLQSI RKRRGKRKRK DCSKDAKEGS VGESVFLGPS DVASASRCKE 240 TSTSNSAQIA RSSGVEDQCR GSGKEVTDDI IGIFSSVAEN DCASVFRRRL DSQKRGRYKK 300 MILRHMDFDT IRSRIASNSI MSVRELFRDM LLVANNALVF YSKNTREYKS ALLLRHIVTA 360 TLRQHFKEYG GKVPITTFNS GRPMHKPTAK PRSIRHDNQK LPGNASNNKN PVVGYSHGSK 420 KRTNAESTPS VESVAVTKKG SAPRPRKVDQ GRSGQKSESP TKGRKTTRAR

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MITERWGTWE ELLLGGAILR HGTRDWNLVA SELRTRTVSP FAFTPEVCKA KYEDLQCRYS  60
GCKAWFEELR KQRMAELRQA LEQSEDSIGS LESKLESLKA EKTDYSRVDY DSSQTESALP  120
CHKSEGVEFS SKNTYKDGLS AGSFTQEAET IWAPDFQIPA AVPTEMDSKP GGDSLTSEGE  180
KISSIDKLAY TFSGGQLQSI RKRRGKRKRK DCSKDAKEGS VGESVFLGPS DVASASRCKE  240
TSTSNSAQIA RSSGVEDQCR GSGKEVTDDI IGIFSSVAEN DCASVFRRRL DSQKRGRYKK  300
MILRHMDFDT IRSRIASNSI MSVRELFRDM LLVANNALVF YSKNTREYKS ALLLRHIVTA  360
TLRQHFKEYG GKVPITTFNS GRPMHKPTAK PRSIRHDNQK LPGNASNNKN PVVGYSHGSK  420
KRTNAESTPS VESVAVTKKG SAPRPRKVDQ GRSGQKSESP TKGRKTTRAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	211	RKRRGKRKRKD
2	203	213	RKRRGKRKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	3e-33	MYB_related family protein