PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022716380.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 669aa MW: 74245.5 Da PI: 5.8392

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022716380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.9	7e-22	127	227	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ ++++ + +l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + XP_022716380.1 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmtQQPPWQ--ELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGA 217 99**************************975444444..8********************************************..348 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_022716380.1 218 NGELRVGVRR 227 9999*997 PP
2	Auxin_resp	115.2	5.7e-38	253	335	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+s+F+v+Y+Pr+s+seF+v v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv d ++++W nS+WrsLk XP_022716380.1 253 ASHAIATRSMFSVFYKPRTSPSEFIVGVNKYLEAQSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNKSSEWANSEWRSLK 335 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MAFAASNLPS AEQQAGITDD PLYRELWHAC AGPLVSLPRE GERVYYFPQG HMEQLEASMH 60 QGLEHQIPSF NLPSKILCKV ASVQRKAEPD TDEVYAQITL VPEVDQSKVT SPDDPLPEPE 120 TVMVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMTQ QPPWQELVAT DLHGNEWHFR 180 HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGANGE LRVGVRRLMR QQANMPSSVI 240 SSHSMHLGVL ATASHAIATR SMFSVFYKPR TSPSEFIVGV NKYLEAQSHK LSVGMRFKMR 300 FEGEEVPERR FSGTIVGVGD NKSSEWANSE WRSLKVQWDE PSSILRPDRV SPWELEPLVA 360 TNTSSNSQPA HRNKRARPPV LSLPSSDLSS LGMWKSSVES PFSYCDAQRG HALQKLSSAA 420 KPNSVGFSGN GSLAAVSSNS MYWSNPVESV TESFAPVINK ESSERKQGTG NGCRLFGIQL 480 LDNVNMEENS LVAGGDEQPV PSLDDDSDQL SDPSNLNRSD LPSISCDPEK SCLRSPQESQ 540 SNQIRSCTKV HMQGMAVGRA VDLTRFDCYD DLLRKLEEMF DIKGQLCGSA KNWQVVYTDD 600 EDDRMMVGDD PWNEFCCMVR KIFIYTSEEV KKLSPKIKLP VNDEIKPANP GVDTVVNPED 660 RSSVVGPGC

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MAFAASNLPS AEQQAGITDD PLYRELWHAC AGPLVSLPRE GERVYYFPQG HMEQLEASMH  60
QGLEHQIPSF NLPSKILCKV ASVQRKAEPD TDEVYAQITL VPEVDQSKVT SPDDPLPEPE  120
TVMVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMTQ QPPWQELVAT DLHGNEWHFR  180
HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGANGE LRVGVRRLMR QQANMPSSVI  240
SSHSMHLGVL ATASHAIATR SMFSVFYKPR TSPSEFIVGV NKYLEAQSHK LSVGMRFKMR  300
FEGEEVPERR FSGTIVGVGD NKSSEWANSE WRSLKVQWDE PSSILRPDRV SPWELEPLVA  360
TNTSSNSQPA HRNKRARPPV LSLPSSDLSS LGMWKSSVES PFSYCDAQRG HALQKLSSAA  420
KPNSVGFSGN GSLAAVSSNS MYWSNPVESV TESFAPVINK ESSERKQGTG NGCRLFGIQL  480
LDNVNMEENS LVAGGDEQPV PSLDDDSDQL SDPSNLNRSD LPSISCDPEK SCLRSPQESQ  540
SNQIRSCTKV HMQGMAVGRA VDLTRFDCYD DLLRKLEEMF DIKGQLCGSA KNWQVVYTDD  600
EDDRMMVGDD PWNEFCCMVR KIFIYTSEEV KKLSPKIKLP VNDEIKPANP GVDTVVNPED  660
RSSVVGPGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein