PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022716449.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 848aa    MW: 93225.6 Da    PI: 6.5046
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022716449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox581.6e-181977357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022716449.1 19 KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 77
                    6789*****************************************************97 PP
2START173.11.8e-541693752203
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++ +++l  i +g  g+++l+
  XP_022716449.1 169 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGLAARACGLVSLEPT-KVAEILKDRPSWFRDCRCVDVLSIIPTGngGTIELI 262
                     68999*****************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p+   +ss+vRae+lpSg+li+p+++g+s +++v+hvdl+ ++++++lr+l+
  XP_022716449.1 263 YMQTYAPTTLAAaRDFWTLRYSTSLEDGSLVICERSLTSSTGGPTgppTSSFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLY 357
                     ****************************************99999999*********************************************** PP

                     HHHHHHHHHHHHHHTXXX CS
           START 186 ksglaegaktwvatlqrq 203
                     +s+ + ++k + a+l++ 
  XP_022716449.1 358 ESSKILAQKVTIAALRHI 375
                     *************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    
MALAMHKESL SNKQMDSSKY VRYTPEQVEA LERVYSECPK PSSLRRQQLI RECPILSNIE  60
PKQIKVWFQN RRCREKQRKE ASRLQTVNRK LTAMNKLLME ENDRLQKQVS HLVYENGYMR  120
QQVQTASVTT TDNNSCESVV MSGQHQRQQN PTPQHPQRDA NNPAGLLAIA EETLAEFLSK  180
ATGTAVDWVQ MIGMKPGPDS IGIVAVSRNC SGLAARACGL VSLEPTKVAE ILKDRPSWFR  240
DCRCVDVLSI IPTGNGGTIE LIYMQTYAPT TLAAARDFWT LRYSTSLEDG SLVICERSLT  300
SSTGGPTGPP TSSFVRAEML PSGFLIRPCE GGGSIIHIVD HVDLDVWSVP EVLRPLYESS  360
KILAQKVTIA ALRHIRQIAQ ETSGEIQYGG GRQPAVLRTF SQRLCRGFND AVNGFMDDGW  420
SLMGGDGVED VTIMINSSPG KFLGSQYNTF PSFGGGVLCA KASMLLQNVP PALLVRFLRE  480
HRSEWADYGV DTYSAACLKA SPYAVPCTRP GGFPCSQVIL PLAHTVEHEE LLEVVRLEGH  540
AFTPEDVALA RDMYLLQLCS GIDENAVDAC AQLVFAPIDE SFADDAPLLP SGFRVIPLYP  600
KTVTDGPGAT RTLDLASTLE VGPGSNRTAG DGQPNNYNLR SVLTIAFQFT FENHLRDNVA  660
AMARQYVRSV VGSVQRVAMA ISPSRLSSDM GLKPLPGSPE ALTLARWICR SYRAHTGGEL  720
LRVDSQAGDA LLKQLWHHSD AIMCCSLKTN ASPVFTFANQ VGLDMLETTL VALQDIMLDK  780
ILDEAGRKIL CSEFSKIMQQ GFAYLPAGIC VSSMGRPVSY EQAIAWKVLD DDGVNHCLAL  840
MFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein