PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022716450.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 203aa    MW: 22418.6 Da    PI: 7.3162
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022716450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1025.4e-32108164158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy +Il+RRq+Rak+e+e+k+ +ksrkpylheSRh hAlrR+RgsgGrF
  XP_022716450.1 108 EEPVFVNAKQYYGILRRRQSRAKAESENKV-AKSRKPYLHESRHLHALRRARGSGGRF 164
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTSSEHDISD NNEVDEQQKH SESQDQSSSP ATGLSPSAIT TPNIPYTTPQ HAVAPAAYPY  60
PDPYYRSIFA PYDAQPYPPQ PYGGQHMVHL QLMGIQQAGV PLPSDAVEEP VFVNAKQYYG  120
ILRRRQSRAK AESENKVAKS RKPYLHESRH LHALRRARGS GGRFLNSKKN ENIQNDAASG  180
DKSQSNINLN SDKNEVATTE GTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.24e-56NF-YA family protein