PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022716785.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 524aa    MW: 58441.5 Da    PI: 6.3246
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022716785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS449.22.8e-1371535231374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL++cA+av+++d+  a+ l+++l++++s +g+p+qR+ ay++e+L arla+s+s++ykal+++e +   s+e  +++++++e++P++kf++
  XP_022716785.1 153 LKELLYACAKAVENKDMYTADCLMTQLRQMVSASGEPIQRIGAYMLEGLVARLASSGSSIYKALRCKEPA---SAELPSYMHILYEICPYFKFGY 244
                     5799*****************************************************************9...999999**************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea+++e+rvHiiDf i qG QW++L++aLa+Rp+gpps+RiTg+++p+s   +   le +g+rL k+Ae+++vpfef++ +a + ++
  XP_022716785.1 245 MSANGAIAEAMKEESRVHIIDFRIAQGSQWLTLIHALANRPGGPPSIRITGIDDPTSAyaKGGGLEIVGQRLCKLAESCKVPFEFHA-AAISGTE 338
                     ********************************************************9999999************************.8999*** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L ++pgEa+aVn++++lh+++desv ++++rd++L+lv+slsPkvv++veqea++n+++Fl rfle++++y a+f+s++++lpre++eri
  XP_022716785.1 339 VQLENLGIQPGEAIAVNFAMMLHHMPDESVGTQNHRDRLLRLVRSLSPKVVTLVEQEANTNTAPFLPRFLETMNHYLAIFESIDVSLPRENKERI 433
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE++ l++eivn++aceg er+erhe l+kWr+r+++aGF+p pls+++++++k ll+++ +  y++ee++g l+lgW++r++++ +aWr
  XP_022716785.1 434 NVEQHRLAWEIVNIIACEGPERVERHELLGKWRSRFTMAGFTPCPLSSFVNATIKVLLQRYCD-KYTLEERDGVLYLGWMNRAIIASCAWR 523
                     **************************************************************5.5*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MKASQKHKIT GKYFDQGLDM YQSCSDDCGN GVQHSVQNLE QYCTLESSSG MQNSSTASFS  60
PNGSPASQQN YSYPSDLHHS PDNTCGSPVT GSRVTDNEHD LRHMIRHLET AMLGIDSDNF  120
DIHTITASGE ATEVSIEAGR WKYMMEMITR GDLKELLYAC AKAVENKDMY TADCLMTQLR  180
QMVSASGEPI QRIGAYMLEG LVARLASSGS SIYKALRCKE PASAELPSYM HILYEICPYF  240
KFGYMSANGA IAEAMKEESR VHIIDFRIAQ GSQWLTLIHA LANRPGGPPS IRITGIDDPT  300
SAYAKGGGLE IVGQRLCKLA ESCKVPFEFH AAAISGTEVQ LENLGIQPGE AIAVNFAMML  360
HHMPDESVGT QNHRDRLLRL VRSLSPKVVT LVEQEANTNT APFLPRFLET MNHYLAIFES  420
IDVSLPRENK ERINVEQHRL AWEIVNIIAC EGPERVERHE LLGKWRSRFT MAGFTPCPLS  480
SFVNATIKVL LQRYCDKYTL EERDGVLYLG WMNRAIIASC AWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein