PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717434.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GeBP

Protein Properties

Length: 349aa MW: 39138.3 Da PI: 9.3326

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	120.9	6.4e-38	128	223	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrl+se+Dei++L+G++d+ ak+g++p+++ +af++fvkksi+ +vsk ql+ K+rrL+kKf+++ k k+gk+ fsk+h+qkifelsk iW XP_022717434.1 128 LFQRLFSEDDEIAVLKGMLDYLAKKGVDPFANANAFHDFVKKSIHTDVSKAQLMYKVRRLRKKFENNAGKGKNGKDRIFSKPHEQKIFELSKTIW 222 79********************************************************************************************* PP DUF573 97 g 97 g XP_022717434.1 223 G 223 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MARKRSKIPI EDPPAAASSS SSSSSEEEEE TSSEEEETQT PQTIKNPTLN VKPIATKPME 60 ETSKIKKPRS KLSASPVKAS SAKRPSESEQ EPKEVKRPKK KTSDEEGTGS ATAVEEVNKT 120 GEDAKKQLFQ RLFSEDDEIA VLKGMLDYLA KKGVDPFANA NAFHDFVKKS IHTDVSKAQL 180 MYKVRRLRKK FENNAGKGKN GKDRIFSKPH EQKIFELSKT IWGREGITGN AESSAAKSNG 240 KEKENSKTLV ELNAESLFDK KVDDRETMEV DKKQSKSLGN LFDKMIGVGG LEEEVIKHGL 300 DMIGGEKREA LEEKWRKLQI AELELFLKRN ELLKEQAKLM LDFYKSEDA

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MARKRSKIPI EDPPAAASSS SSSSSEEEEE TSSEEEETQT PQTIKNPTLN VKPIATKPME  60
ETSKIKKPRS KLSASPVKAS SAKRPSESEQ EPKEVKRPKK KTSDEEGTGS ATAVEEVNKT  120
GEDAKKQLFQ RLFSEDDEIA VLKGMLDYLA KKGVDPFANA NAFHDFVKKS IHTDVSKAQL  180
MYKVRRLRKK FENNAGKGKN GKDRIFSKPH EQKIFELSKT IWGREGITGN AESSAAKSNG  240
KEKENSKTLV ELNAESLFDK KVDDRETMEV DKKQSKSLGN LFDKMIGVGG LEEEVIKHGL  300
DMIGGEKREA LEEKWRKLQI AELELFLKRN ELLKEQAKLM LDFYKSEDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25210.1	2e-44	GeBP family protein