PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717453.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 775aa    MW: 86168.1 Da    PI: 5.9608
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.14e-2062117156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e++F++n++p+ ++r +L+++lgL+ rqVk+WFqNrR++ k
  XP_022717453.1  62 KKRYHRHTARQIQEMEAVFKENPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQIK 117
                     688899**********************************************9877 PP
2START152.34.1e-482604872206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     la + ++elvk+ +a+ep+Wv+    eng+e l  +e ++              +++ea+r+s+vv+m++++lv  +ld + +W e ++    +a
  XP_022717453.1 260 LAMSSMDELVKMCQANEPLWVRNN--ENGKELLNLEEHARMfhwplslkqrsseFRTEASRDSAVVIMNSVTLVDAFLDAN-KWAELFPsvvaRA 351
                     67789*****************99..9999999999888889***************************************.******99999** PP

                     EEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE....TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
           START  80 etlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq...lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                     +t++vis+g     g lqlm+aelq+lsplvp R+ +f+Ry++q   + +  w+ivd  +d   ++  +ss+   +++ Sg+li++++ng+s+vt
  XP_022717453.1 352 KTVQVISPGvsgtnGSLQLMYAELQVLSPLVPtREAYFLRYCQQqnlKDETYWAIVDFPLDGFHNNL-QSSFPLYRRRASGCLIQDMPNGYSRVT 445
                     ********************************************996666779********999998.77777777******************* PP

                     EEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 166 wvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     wveh++  +  p h+++ ++v +g+a+ga++w+a  +rqce+
  XP_022717453.1 446 WVEHAEIIEEKPvHQIFSHFVYNGIAFGAQRWLAVSERQCER 487
                     ******9999999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 775 aa     Download sequence    
MYGDCQIMSS VGGNVPLPPM VPKEENGLFL RGKEGMDSGS GSEQAEEKSG NEQESTEQPP  60
KKKRYHRHTA RQIQEMEAVF KENPHPDDKQ RMKLSQELGL KPRQVKFWFQ NRRTQIKAQQ  120
DRSDNVILRA ENESLKNEFY RLQAELSKLV CPNCGGPAVP GGVSFEELRM ENARLREEVE  180
RVCAIASRYI GRPIQIMGAA PAMMPPSLDL DMNIYPRHFT EPMASCAEMM PVPMLPETAT  240
YPENNNLVLM DEEKTVAMEL AMSSMDELVK MCQANEPLWV RNNENGKELL NLEEHARMFH  300
WPLSLKQRSS EFRTEASRDS AVVIMNSVTL VDAFLDANKW AELFPSVVAR AKTVQVISPG  360
VSGTNGSLQL MYAELQVLSP LVPTREAYFL RYCQQQNLKD ETYWAIVDFP LDGFHNNLQS  420
SFPLYRRRAS GCLIQDMPNG YSRVTWVEHA EIIEEKPVHQ IFSHFVYNGI AFGAQRWLAV  480
SERQCERIAS LMARNITDLG VIPSLEARKN LMRLAQRMIR TFCVNISTSS GQLWTALPDS  540
ADDTVRITTR KITEPGQPNG LILCAVSTTW LPYPHYQVFD LLRDERRRAQ LEVLSNGNAL  600
HEVAHIANGA HPGNCISLLR INVASNSSQH VELMLQESCT DRSGSLVVYS TVDVDSVQLA  660
MSGEDPSCIP LLPIGFYLTP VELIRDASGE GKSVPPSEEA NGHISGSLLT VGLQVLASSV  720
PSTKINLSSI AAINNHLCTT VHQISAALSS SSTPSCPRNG NGLGSCAEPA SAPEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein