PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717458.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 756aa    MW: 84220.8 Da    PI: 6.0604
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.23.9e-204398156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t+ q++e+e++F++n++p+ ++r +L+++lgL+ rqVk+WFqNrR++ k
  XP_022717458.1 43 KKRYHRHTARQIQEMEAVFKENPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQIK 98
                    688899**********************************************9877 PP
2START152.44e-482414682206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     la + ++elvk+ +a+ep+Wv+    eng+e l  +e ++              +++ea+r+s+vv+m++++lv  +ld + +W e ++    +a
  XP_022717458.1 241 LAMSSMDELVKMCQANEPLWVRNN--ENGKELLNLEEHARMfhwplslkqrsseFRTEASRDSAVVIMNSVTLVDAFLDAN-KWAELFPsvvaRA 332
                     67789*****************99..9999999999888889***************************************.******99999** PP

                     EEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE....TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
           START  80 etlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq...lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                     +t++vis+g     g lqlm+aelq+lsplvp R+ +f+Ry++q   + +  w+ivd  +d   ++  +ss+   +++ Sg+li++++ng+s+vt
  XP_022717458.1 333 KTVQVISPGvsgtnGSLQLMYAELQVLSPLVPtREAYFLRYCQQqnlKDETYWAIVDFPLDGFHNNL-QSSFPLYRRRASGCLIQDMPNGYSRVT 426
                     ********************************************996666779********999998.77777777******************* PP

                     EEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 166 wvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     wveh++  +  p h+++ ++v +g+a+ga++w+a  +rqce+
  XP_022717458.1 427 WVEHAEIIEEKPvHQIFSHFVYNGIAFGAQRWLAVSERQCER 468
                     ******9999999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    
MVPKEENGLF LRGKEGMDSG SGSEQAEEKS GNEQESTEQP PKKKRYHRHT ARQIQEMEAV  60
FKENPHPDDK QRMKLSQELG LKPRQVKFWF QNRRTQIKAQ QDRSDNVILR AENESLKNEF  120
YRLQAELSKL VCPNCGGPAV PGGVSFEELR MENARLREEV ERVCAIASRY IGRPIQIMGA  180
APAMMPPSLD LDMNIYPRHF TEPMASCAEM MPVPMLPETA TYPENNNLVL MDEEKTVAME  240
LAMSSMDELV KMCQANEPLW VRNNENGKEL LNLEEHARMF HWPLSLKQRS SEFRTEASRD  300
SAVVIMNSVT LVDAFLDANK WAELFPSVVA RAKTVQVISP GVSGTNGSLQ LMYAELQVLS  360
PLVPTREAYF LRYCQQQNLK DETYWAIVDF PLDGFHNNLQ SSFPLYRRRA SGCLIQDMPN  420
GYSRVTWVEH AEIIEEKPVH QIFSHFVYNG IAFGAQRWLA VSERQCERIA SLMARNITDL  480
GVIPSLEARK NLMRLAQRMI RTFCVNISTS SGQLWTALPD SADDTVRITT RKITEPGQPN  540
GLILCAVSTT WLPYPHYQVF DLLRDERRRA QLEVLSNGNA LHEVAHIANG AHPGNCISLL  600
RINVASNSSQ HVELMLQESC TDRSGSLVVY STVDVDSVQL AMSGEDPSCI PLLPIGFYLT  660
PVELIRDASG EGKSVPPSEE ANGHISGSLL TVGLQVLASS VPSTKINLSS IAAINNHLCT  720
TVHQISAALS SSSTPSCPRN GNGLGSCAEP ASAPEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein