PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717601.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YC

Protein Properties

Length: 261aa MW: 29364.4 Da PI: 6.5163

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	177.2	1.6e-55	88	192	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdfl XP_022717601.1 88 QLQMFWANQmqeIEQMADFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 182 89****988889***************************************************************************** PP NF-YC 93 vdivprdelk 102 vdi+prdelk XP_022717601.1 183 VDIIPRDELK 192 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MDQSEQTQKQ QQQQQQQQPV MGVVPGAGEM GYSSSPYQTA PLFAAGTPAV AVPSPTQPPA 60 AFSSSPRQLA YQQAQHFHHQ QQQQQQQQLQ MFWANQMQEI EQMADFKNHS LPLARIKKIM 120 KADEDVRMIS AEAPVVFAKA CEMFILELTL RSWIHTEENK RRTLQKNDIA AAISRTDVFD 180 FLVDIIPRDE LKEEGLGVTK AANPLVGSPA DIPYYYVPQH TVGPTGMIMG KPVDQAALYP 240 GQQPRPPMAF MPWPQRQPQQ Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	167	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	2e-72	NF-YC family protein