PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717702.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 332aa    MW: 37819.3 Da    PI: 9.3933
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.5e-1763107147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ eE+e++++++  lG++ W++Ia +++ gRt++++k++w+++
   XP_022717702.1  63 RGKFSLEEEEIIIQLHSVLGNK-WSAIATRLP-GRTDNEIKNYWNTH 107
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGKPPCCDKN GLKKGPXLRR RIKIDXLFRK HGHGRWRTLP KMQRCGKSCR LRWTNYLRPD  60
IKRGKFSLEE EEIIIQLHSV LGNKWSAIAT RLPGRTDNEI KNYWNTHIKK KLLRMGIDPV  120
THSPRLDLLE LSSLLSSSLY NSSQLNPTGL LGIGSMFNPN CLNLATALMS SQNKNLEIGT  180
TPGNVQQNQT GNFQCQNQFE FYQGNQVQNP IQACTQILQA NLNHFSTNPT SLTCQNSTLP  240
NLWQEYDREN INVSNSKGFF PMQNYGYHEF NQSNINSLAG QNQTFFSENI PNLHLTSGHF  300
YSTPSSSLNS LEFIDDIMST TMAAVTEEYC KR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.13e-67MYB family protein