PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717825.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 142aa    MW: 15519 Da    PI: 10.848
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.45.9e-164401450
                    HHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF 14 skRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    skRr  ++KKA ELS+LC+a+va++ +s++gk+  ++
  XP_022717825.1  4 SKRRGNLFKKATELSTLCGARVAIVTISEKGKVSMFP 40
                    8********************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MATSKRRGNL FKKATELSTL CGARVAIVTI SEKGKVSMFP NSDTVIHRYV TRKGSLKSTS  60
GNGMMKLRKK QHVEGAKKEA VKKAEMKELM NNQSAEKAVG VDIATPVDLR SQWPGVTCAA  120
EWSSSIADVI LNSRSDMGSR KF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-12M-type_MADS family protein