PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717847.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 235aa MW: 27129.2 Da PI: 4.8486

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	2.1e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l+ ++ ++G +W+ a++ g+ R++k+c++rw +yl XP_022717847.1 14 KGTWSPDEDQKLITYIMRHGIWNWNEMAKYAGLSRSGKSCRLRWVNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	53.2	6.8e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T eE+e +v++ k+lG++ W++Ia++++ Rt++++k++w++ XP_022717847.1 67 RGNFTREEEETIVQLQKMLGNR-WSAIAAKLP-QRTDNDIKNYWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MVRQPSWDRT CLKKGTWSPD EDQKLITYIM RHGIWNWNEM AKYAGLSRSG KSCRLRWVNY 60 LRPNIKRGNF TREEEETIVQ LQKMLGNRWS AIAAKLPQRT DNDIKNYWNT RLKKGAVENN 120 SASAIASRSE INSSLDAGEE NSSDADSSMF LNNLLDSPIP TLEDFPLPAT YIFSPSDCNR 180 GAVVDDNYTM EDNFISSEKQ PQPMSPNSQL WLHDPIYVRD SDYDPVDDFW VNPFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	5e-51	MYB family protein