PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717850.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 240aa MW: 27645.1 Da PI: 5.4009

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47	6e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l+ ++ ++G +W+ +++ g+ R++k+c++rw +yl XP_022717850.1 14 KGTWSPDEDQKLITYIMRHGIWNWNEMPKYAGLARSGKSCRLRWMNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	53.6	5.1e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T eEde +v++ k+lG++ W++Ia++++ Rt++++k++w++ XP_022717850.1 67 RGNFTREEDETIVQLQKMLGNR-WSAIAAMLP-QRTDNDIKNYWNS 110 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MVRQPSWNKT CLKKGTWSPD EDQKLITYIM RHGIWNWNEM PKYAGLARSG KSCRLRWMNY 60 LRPNIKRGNF TREEDETIVQ LQKMLGNRWS AIAAMLPQRT DNDIKNYWNS RLKKRVVVEN 120 NSVSATTPAT EINSGVKSDS DSLFLDTLLD SLIPKLKDFP EPATCTFSPS GSNHAAVVDN 180 TCSMENNFVS SEKCWEIQSF SDNDCCQALS PNSQLWLYEP IYECNSNYDP VDDFWDSPFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-51	MYB family protein