PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717851.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 241aa MW: 27671.1 Da PI: 5.418

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.6	2.8e-13	19	62	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +++Ed++l+ ++k++G +W+ +++ g+ R++k+c++rw +yl XP_022717851.1 19 SPDEDQKLIAYIKKYGIWNWNEMPKYAGLSRSGKSCRLRWMNYL 62 79************99**********************97 PP
2	Myb_DNA-binding	53.4	6.1e-17	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T eE+e +v++ k+lG++ W++Ia++++ Rt++++k++w++ XP_022717851.1 68 RGNFTREEEETIVQLQKMLGNR-WSAIAAMLP-QRTDNDIKNYWNT 111 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MVRQPSRNGT CFLQKGTRSP DEDQKLIAYI KKYGIWNWNE MPKYAGLSRS GKSCRLRWMN 60 YLRPNIKRGN FTREEEETIV QLQKMLGNRW SAIAAMLPQR TDNDIKNYWN TRLKKRVVLE 120 NNSASATTPA TEIISGIKSD ANSLFLDTLL GSPIPKLEDF PEPATCIFSA SGSNHAAVVD 180 NTCTMDDNFV SSEKYWNIQS FSDNDYCQAL SPNSQLWLYE PIYECNSNYD PVDDFWDSPF 240 I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	6e-49	MYB family protein