PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717952.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 465aa MW: 50697.6 Da PI: 6.8046

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.6	6.7e-06	356	394	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_022717952.1 356 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 394 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MADEFNTGTN WWDSSRTAGS SSSSSGLNNS LGSYGWATEM VDIKIAAARS SMDSVSSVSG 60 SSAVFQDNPK LQIGPDHPPG DLHMMGLGLS SQAIDWNQAL LRGDKSESSF RSMLQDHNLN 120 NSNANYHQDQ TGGIGSSQVQ WRDKMFSGVG GDAPVNEFKQ ISRGFSLDQS SQFSPHGSSS 180 DSTVTSQGFP SSFQMDSAAL YASPTTLQGL LGSENQAQQQ SSYENRSLSY QYGAAAASYG 240 MNTNDQLLPN SWSKVPQFLR SSPPKQQQQH LHGQLHFSNN APFWNPSAAA SMSEHVRPGF 300 FPSLQTQFAT GNFDEKTKQN ISEVRDSSTV VKKSGNEPTS KRPRNENPST LPPFKVRKEK 360 MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVSV LSTPYMKSGA ATQHQQNSEK 420 SKDPEGPKQD LRSRGLCLVP VSSTFPVTHE PTADFWTPTY GGTYR

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MADEFNTGTN WWDSSRTAGS SSSSSGLNNS LGSYGWATEM VDIKIAAARS SMDSVSSVSG  60
SSAVFQDNPK LQIGPDHPPG DLHMMGLGLS SQAIDWNQAL LRGDKSESSF RSMLQDHNLN  120
NSNANYHQDQ TGGIGSSQVQ WRDKMFSGVG GDAPVNEFKQ ISRGFSLDQS SQFSPHGSSS  180
DSTVTSQGFP SSFQMDSAAL YASPTTLQGL LGSENQAQQQ SSYENRSLSY QYGAAAASYG  240
MNTNDQLLPN SWSKVPQFLR SSPPKQQQQH LHGQLHFSNN APFWNPSAAA SMSEHVRPGF  300
FPSLQTQFAT GNFDEKTKQN ISEVRDSSTV VKKSGNEPTS KRPRNENPST LPPFKVRKEK  360
MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVSV LSTPYMKSGA ATQHQQNSEK  420
SKDPEGPKQD LRSRGLCLVP VSSTFPVTHE PTADFWTPTY GGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	2e-86	bHLH family protein