PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717960.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 355aa MW: 39995.8 Da PI: 8.54

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.1	4.9e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g++R++k+c++rw +yl XP_022717960.1 14 KGPWTAEEDQKLIDYIRKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+e++++++ lG++ W++Ia +++ gRt++++k++w+++ XP_022717960.1 67 RGKFSLEEEEIIIQLHSVLGNK-WSAIATRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MGKPPCCDKN GLKKGPWTAE EDQKLIDYIR KHGHGRWRTL PKNAGLKRCG KSCRLRWTNY 60 LRPDIKRGKF SLEEEEIIIQ LHSVLGNKWS AIATRLPGRT DNEIKNYWNT HIKKKLLRMG 120 IDPVTHSPRL DLLELSSLLS SSLYNSSQLN PTGLLGIGSM FNPNCLNLAT ALMTSQNKNL 180 EIGTTPGNVQ QNQTGNFQCQ NQCEFYQGNQ VQNPIQACTQ IWQANLNHFS TNPTSLTCQN 240 STLPNLWQEY DRENINVSNS KGFFPMQNYG YHEFNQSNIN SLAGQNQTFF SENIPNLNTF 300 RSLLSTPSSS STPLNSSTTY VNNNGSSTED IERDSYCSNM LMFDVPNGLN VNGSV

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MGKPPCCDKN GLKKGPWTAE EDQKLIDYIR KHGHGRWRTL PKNAGLKRCG KSCRLRWTNY  60
LRPDIKRGKF SLEEEEIIIQ LHSVLGNKWS AIATRLPGRT DNEIKNYWNT HIKKKLLRMG  120
IDPVTHSPRL DLLELSSLLS SSLYNSSQLN PTGLLGIGSM FNPNCLNLAT ALMTSQNKNL  180
EIGTTPGNVQ QNQTGNFQCQ NQCEFYQGNQ VQNPIQACTQ IWQANLNHFS TNPTSLTCQN  240
STLPNLWQEY DRENINVSNS KGFFPMQNYG YHEFNQSNIN SLAGQNQTFF SENIPNLNTF  300
RSLLSTPSSS STPLNSSTTY VNNNGSSTED IERDSYCSNM LMFDVPNGLN VNGSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	3e-87	MYB family protein