PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717999.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family SBP
Protein Properties Length: 192aa    MW: 21690.2 Da    PI: 9.4184
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP140.25.7e-4469145278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cqve+C  dls++k+yhrrhkvCe+h+kapvv+v+g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++a
  XP_022717999.1  69 CQVENCGLDLSDVKRYHRRHKVCEIHAKAPVVVVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKTSA 145
                     **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MEATGFRRKC ASKANMNKDF MADQDFDNDM EEEEEEGVGD HGFPDDEKKK KAYGRKGSSG  60
AGGVSRPSCQ VENCGLDLSD VKRYHRRHKV CEIHAKAPVV VVAGIRQRFC QQCSRFHELS  120
EFDEAKRSCR RRLAGHNERR RKTSAESSAE GSSRKGMSPQ LKESHCRQAD DQRARVPIAI  180
PGNSSFKRSQ IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.12e-50SBP family protein