PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718004.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 180aa MW: 21325 Da PI: 9.7017

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.8	1.6e-17	14	67	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ ++++eq++ Le+ F+ n+++ e + +LA++lg++ rqV +W+qN+Ra++k XP_022718004.1 14 NKKRLNQEQVRLLEKSFNANKKLEPELKLHLANQLGVPARQVAIWYQNKRARWK 67 56789************************************************9 PP
2	HD-ZIP_I/II	105.3	4.9e-34	14	105	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl++eqv+lLE+sF++++kLepe K +la++Lg+ +rqva+W+qn+RAR+kt+ lE dy++L+ ++++ +e++rLek+v+ L+ el++ XP_022718004.1 14 NKKRLNQEQVRLLEKSFNANKKLEPELKLHLANQLGVPARQVAIWYQNKRARWKTQSLELDYNTLQVKLENALSEKRRLEKDVKYLQGELRK 105 79*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MEFQSQKIYS PKHNKKRLNQ EQVRLLEKSF NANKKLEPEL KLHLANQLGV PARQVAIWYQ 60 NKRARWKTQS LELDYNTLQV KLENALSEKR RLEKDVKYLQ GELRKAQEMM FAMNNQRDNH 120 RQYQYQHQHH HLPNFVSCNS KGSSEGGSSG FHEDNVHDHE VLQIDELYTC LIGGHRSTWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	2e-39	HD-ZIP family protein