PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022718032.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 182aa    MW: 20488.2 Da    PI: 8.6897
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022718032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY176.41.8e-5461594170
           YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 
                     +s++eq+Cy+ Cn Cn ilav+vP +slf++vtvrCG C++l svnla++ q +a ++        +++++  ++e  ++         s+s+s+
  XP_022718032.1   6 NSAPEQLCYIPCNLCNIILAVNVPCSSLFETVTVRCGQCANLCSVNLATSFQSRAGKDI-------QVANNYTSSEYRFDLG-------SSSRSK 86 
                     6899*********************************************9999999884.......4455554444444433.......333333 PP

           YABBY  99 eklsenedeevprv.ppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     +kl++     ++ +   v+rPP+kr r+Ps yn+fikeeiqrik +nPdi+hreafs+aaknWa fP+ihfgl
  XP_022718032.1  87 NKLPKRAPTITTTPeTVVNRPPDKRHRAPSLYNQFIKEEIQRIKLNNPDITHREAFSTAAKNWARFPHIHFGL 159
                     3443333332222203489****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MSSSNNSAPE QLCYIPCNLC NIILAVNVPC SSLFETVTVR CGQCANLCSV NLATSFQSRA  60
GKDIQVANNY TSSEYRFDLG SSSRSKNKLP KRAPTITTTP ETVVNRPPDK RHRAPSLYNQ  120
FIKEEIQRIK LNNPDITHRE AFSTAAKNWA RFPHIHFGLM LETDSQPKLN DDSTEHFQQL  180
LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.14e-79YABBY family protein