PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718106.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 379aa MW: 42728.3 Da PI: 5.1058

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	9.6e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l+ ++++G ++W++ ++ g+ R++k+c++rw +yl XP_022718106.1 16 RGPWSPAEDLRLITFIRKHGHENWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	50.2	5.9e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e ++++++ lG++ W++Ia+++ gRt++++k+ w+++l XP_022718106.1 69 RGNFSKEEEETIIRLHETLGNK-WSKIASHLA-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MGKGRAPCCD KDKVKRGPWS PAEDLRLITF IRKHGHENWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFSKEEEETI IRLHETLGNK WSKIASHLAG RTDNEIKNVW NTHLKKKLAS 120 KNGNIPQKDE SKQCSMTSSA SCSSITFVSS SCGKRNLEVE HEKQWDEGSV NKMPREAFAV 180 AVSDKTQDFN AVLSNHNCSP SEEPKELSSS SMSSNITNAS QVDVSNPENQ SDSLFNFIGV 240 CDTNNISEEV NKPEISDTAF NIPLESDLDF WNMLDSLGLF QSDEIQSNEV EGNQSTNFGD 300 GYSKEAENNK WLHYLENELG LEATRNENQD NLSKDAAEPP VPDMYDMLLE PEADMGMGHH 360 HIWPSSITTQ FSYPNQIQQ

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MGKGRAPCCD KDKVKRGPWS PAEDLRLITF IRKHGHENWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFSKEEEETI IRLHETLGNK WSKIASHLAG RTDNEIKNVW NTHLKKKLAS  120
KNGNIPQKDE SKQCSMTSSA SCSSITFVSS SCGKRNLEVE HEKQWDEGSV NKMPREAFAV  180
AVSDKTQDFN AVLSNHNCSP SEEPKELSSS SMSSNITNAS QVDVSNPENQ SDSLFNFIGV  240
CDTNNISEEV NKPEISDTAF NIPLESDLDF WNMLDSLGLF QSDEIQSNEV EGNQSTNFGD  300
GYSKEAENNK WLHYLENELG LEATRNENQD NLSKDAAEPP VPDMYDMLLE PEADMGMGHH  360
HIWPSSITTQ FSYPNQIQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56160.1	3e-73	MYB family protein