PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718108.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 177aa MW: 20563.2 Da PI: 9.6887

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+ ++ ++G +W+ I+++ g+ Rt+k+c++rw++yl XP_022718108.1 14 KGGWSAEEDEKLIAYISRYGIWNWNEIPKHAGLSRTGKSCRLRWLNYL 61 688***************99**********************97 PP
2	Myb_DNA-binding	49.9	7.2e-16	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE+e++v+++ lG++ W++Ia++++ Rt++++k++w + XP_022718108.1 67 RGNITREEEEIIVKLHSILGNR-WAAIAAKLP-QRTDNEIKNYWKT 110 7999****************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MAKNPAKDKK ILRKGGWSAE EDEKLIAYIS RYGIWNWNEI PKHAGLSRTG KSCRLRWLNY 60 LRPGIKRGNI TREEEEIIVK LHSILGNRWA AIAAKLPQRT DNEIKNYWKT RIQRRNRDFC 120 SKIEPPAESE DKYYAAEVKP QKNNVSETDS SFPNSLSQLP ETEESPDSTT YDHLPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	9e-51	MYB family protein