PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718151.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 345aa MW: 38393.7 Da PI: 8.0118

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1.1e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_022718151.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.6	5.9e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_022718151.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MFQPKKPSTM NSHDRSMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK EDLQRNAASS SGMMARSMNE 120 MQMEVQRRLH EQLEVQRHLQ LRIEAQGKYM QSILEKACQT LAGENLAAGG YKGIGNQDMG 180 AMKDFGPLNF PPFQDLNIYG GDQLDLQHNM DRPSLDGFMP NNDNICLGKK RPSPYGGSGK 240 SPLMWSDELR LQDLGTAPSC LGPQDDPFKT DIAPPSIDIN TDLDSISEIY EAKPVLSSDG 300 MGEKKFEASP KLERPPSRRA AVQTERMNPM INSGSVAQGR NSPFG

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MFQPKKPSTM NSHDRSMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK EDLQRNAASS SGMMARSMNE  120
MQMEVQRRLH EQLEVQRHLQ LRIEAQGKYM QSILEKACQT LAGENLAAGG YKGIGNQDMG  180
AMKDFGPLNF PPFQDLNIYG GDQLDLQHNM DRPSLDGFMP NNDNICLGKK RPSPYGGSGK  240
SPLMWSDELR LQDLGTAPSC LGPQDDPFKT DIAPPSIDIN TDLDSISEIY EAKPVLSSDG  300
MGEKKFEASP KLERPPSRRA AVQTERMNPM INSGSVAQGR NSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-126	G2-like family protein