PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718602.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 362aa MW: 40528.5 Da PI: 6.9532

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_022718602.1 15 KGPWTPEEDHILVDYIQKHGHGSWRSLPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.3e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ ++++++ lG++ W++Ia ++ gRt++++k++w+++l XP_022718602.1 68 RGKFSEEEEQTIINLHAVLGNK-WSAIATHLS-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MMGRSPRRDE NGLKKGPWTP EEDHILVDYI QKHGHGSWRS LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEEEEQTII NLHAVLGNKW SAIATHLSGR TDNEIKNFWN THLKKKLLQM 120 GIDPVTHRPR TDLNILANLP QLLAAVNFSN LINNPLDNAL RLQSDAAQLA KIQLMHNILQ 180 VLGTSSTSSS SCCTPPTIEV IMNLLAGPTF RGNHQLYESQ LEGNSNLPFG FAPHELTQLQ 240 SSFLNLEASQ HQPQFSEYHQ PMKDSKICST NNDQFASSSS SPSINPTSTP LQLPALAPAS 300 PERLPATVYQ TENKNFNQKD ISNLSSTSTT FEAWGDLMDD EASDSYWRDI IDQASSQSWP 360 IS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MMGRSPRRDE NGLKKGPWTP EEDHILVDYI QKHGHGSWRS LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSEEEEQTII NLHAVLGNKW SAIATHLSGR TDNEIKNFWN THLKKKLLQM  120
GIDPVTHRPR TDLNILANLP QLLAAVNFSN LINNPLDNAL RLQSDAAQLA KIQLMHNILQ  180
VLGTSSTSSS SCCTPPTIEV IMNLLAGPTF RGNHQLYESQ LEGNSNLPFG FAPHELTQLQ  240
SSFLNLEASQ HQPQFSEYHQ PMKDSKICST NNDQFASSSS SPSINPTSTP LQLPALAPAS  300
PERLPATVYQ TENKNFNQKD ISNLSSTSTT FEAWGDLMDD EASDSYWRDI IDQASSQSWP  360
IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-105	MYB family protein