PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718834.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 244aa MW: 26579.8 Da PI: 6.145

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.7	5.2e-40	41	142	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p ++r+da+ ++ yeA+ar++dPvyG+v++il+lqqq+++l+ael XP_022718834.1 41 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPVNQRHDAVVTISYEAQARLSDPVYGCVSTILSLQQQVASLQAEL 135 7*********************9989*************************************************************** PP DUF260 95 allkeel 101 al++++l XP_022718834.1 136 ALVQNQL 142 *9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MAEPQCHGVS ETRRKGTSKR ATMPVEAEPV VAELAPVPAA PCGACKFLRR KCISGCIFAP 60 HFGSDQGAAR FAAVHKVFGA SNVSKLLLHI PVNQRHDAVV TISYEAQARL SDPVYGCVST 120 ILSLQQQVAS LQAELALVQN QLINSRIAMV NALESSQQQQ QQQQQHEQRI ALLQPAYSNN 180 SSASNNLINI SNFTSNFDLV AETTAPSSQS MDRLQLSEPC NDEEDDEQDS QIPAIFANQI 240 IHSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	2e-58	LBD family protein