PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022718860.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 327aa    MW: 35546 Da    PI: 7.1503
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022718860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.26.9e-1293137347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
   XP_022718860.1  93 PWTEEEHRMFLLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKY 137
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSQYSGS NSGPHNGNGS  60
GSPGEGPDHA DGYASEDFVP GSSSSRERKK GVPWTEEEHR MFLLGLQKLG KGDWRGISRN  120
YVISRTPTQV ASHAQKYFIR QSNFSRRKRR SSLFDIVADE SGDTPMVSQD LFSANHSQAE  180
TQSNDQLPIP PPLDEEDESM DSNNSNDGET VPPKLESSQS CYPVVYPAYF SPFIPFSFPY  240
WMGYNTEPTK KDTHEVLKPT AVHSKSPINV DELVGMSKLS LGESIGDSGP SSLSLKLDGS  300
SRQSAFHANP ASGNSSMNSS GSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-116MYB_related family protein