PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022718874.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 316aa    MW: 35844.8 Da    PI: 8.073
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022718874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.23.4e-172673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEde l++++k+ G g+W+t +++ g+ R++k+c++rw +yl
   XP_022718874.1 26 RGPWTPEEDEVLANYIKREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 73
                     89******************************99************97 PP
2Myb_DNA-binding48.32.3e-1579124148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rgr  ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
   XP_022718874.1  79 RGRIAPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 124
                      678889****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MRNPSLLGTS TTSKSTPCCS KVGIKRGPWT PEEDEVLANY IKREGEGRWR TLPKRAGLLR  60
CGKSCRLRWM NYLRPSVKRG RIAPDEEDLI LRLHRLLGNR WSLIAGRIPG RTDNEIKNYW  120
NTHLSKKLIS QGIDPRTHKP LNLVSHASSQ ANHDPVPKSH PNPPHSNSSE LGEKSITITT  180
QDFKPTNQEN HQQYQSQHVV DNSMANWYNA EGASATHIMG QPSSSHGNEG DYIENYNEDM  240
FSSFLDSLIN DNYLFVNQQQ QPQPQPQPNN VVADAASADQ NFMSHGNIWE AEIMSSMVPF  300
GNEQNSFNNH HQHHRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.15e-78MYB family protein