PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022719194.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 792aa    MW: 86872.2 Da    PI: 5.5754
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022719194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS329.65.8e-1014317913374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL+++Ae v +g+++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l+   ++ +++ pp++ ++ +++ ++ a+k+fsevsP+++f ++t
  XP_022719194.1 431 DLLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQFILLM--NNPVSSPPPRSPTPFDVIFKMGAYKVFSEVSPLIQFVNFT 523
                     79**********************************************99997..5555667888888899************************ PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl..e 190
                     +Nqa+lea+  ++r+Hi+Dfdi+ G+QW++++q+L  R++g+pslRiT+++sp+ ++  el  ++e+L +fA+e+g++fe +vl  ++l++   +
  XP_022719194.1 524 CNQALLEALGDADRIHIVDFDIGFGAQWASFMQELPMRSRGAPSLRITAFASPSMHHPIELGLMRENLMQFANEVGISFELEVLNFNSLDQTpyS 618
                     ************************************************************************************99988887557 PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l ++r +++Ea+aVn+ +   +  +++ +l++    +L++vk+lsPk+vv  ++ +d+n+ +F +++++a++ y  l++sl+a    +s++ +k+
  XP_022719194.1 619 LPMFRSNENEAIAVNFPV--WSSSNQPSALPN----LLRFVKQLSPKIVVSLDRGCDRNDLPFPQHIVHAFQSYINLLESLDAA-NVTSDAVNKI 706
                     78899999********99..444455666666....*********************************************666.5799****** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er+ll ++i++ v  +  +     e++  W+  +++ GF+pv++s+++++qa++++++ +++g++ve++ +slvl+W++r L+s+SaWr
  XP_022719194.1 707 ERFLLVPRIESTVFGRLHA----PEKMPLWKTLFSATGFSPVTFSNFTETQAECVVKRAQVRGFHVEKRLASLVLCWQRRDLISTSAWR 791
                     *************988777....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 792 aa     Download sequence    
MHFQIQAKGA VELAGFASIC QQDKWIKQLE ANSFGFANSF YYNNEQEPTS VLHMRRSQSP  60
PTSASTISSS FNGGAAGAGG GGNSTDNTTT TAATIAPPET PLPNNNKEEW ATDLQPIPSE  120
LDLVPGPGGA QRCNLGLEDW DTMLSESAVS PSQDHSLLRW IAGDADDQSF GLKQLLQSGS  180
TGPNQGLDFE GNAGLGIVDQ GPGFDLIGSL VSSVSCNVSA ASNLGGFPGS GFVPNAYNNG  240
NGNIGSVMPS CSSVGLVNNH KVLGATVGLN TNIQNPMFTS PTDNIDPPVS LPMLYQQQQG  300
QYLGSQEEKP QILNQQVLMG QQQHPQSPNF FLPLPQEQHL LQPLPKRLNP GNLELSSQIP  360
KLPFSDAGHE LFMRKQQQED MGFPQGVQIV SQQKPLMVAK QKVLGPGEEM LQQQEQHQYQ  420
LHQQQEATLF DLLYKAAELV GTGNFSHAQG ILARLNHQLS PVGKPLQRAA FYFKEALQFI  480
LLMNNPVSSP PPRSPTPFDV IFKMGAYKVF SEVSPLIQFV NFTCNQALLE ALGDADRIHI  540
VDFDIGFGAQ WASFMQELPM RSRGAPSLRI TAFASPSMHH PIELGLMREN LMQFANEVGI  600
SFELEVLNFN SLDQTPYSLP MFRSNENEAI AVNFPVWSSS NQPSALPNLL RFVKQLSPKI  660
VVSLDRGCDR NDLPFPQHIV HAFQSYINLL ESLDAANVTS DAVNKIERFL LVPRIESTVF  720
GRLHAPEKMP LWKTLFSATG FSPVTFSNFT ETQAECVVKR AQVRGFHVEK RLASLVLCWQ  780
RRDLISTSAW RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-118GRAS family protein