PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022719585.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 155aa    MW: 17143.2 Da    PI: 8.2174
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022719585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH32.91.1e-106082527
                    --SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                    lC++f++tG+C+yGd+Ck+ H++
  XP_022719585.1 60 LCNRFLKTGFCQYGDNCKYFHPK 82
                    8********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MPLGKYYCDY CGKQFQDTPS ARKRHLQGLQ HLRAKAQWFH SLNATNDPNH SFTEPFAKGL  60
CNRFLKTGFC QYGDNCKYFH PKKDSPTTNP QAAPEPAPES DESNSHNSSF NAPKTLLLSS  120
GVEGAGMGMT WGNLPPSLKP PPEGGYPPLP FVDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.11e-29C3H family protein