PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022719823.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 198aa    MW: 22749.6 Da    PI: 8.6538
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022719823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.94.1e-26958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien   rqvtf+kRr+g+lKKA+ELSvLCdae+ v+ifs +gklye +
  XP_022719823.1  9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVLIFSAHGKLYELA 58
                    79*********************************************965 PP
2K-box56.71e-198917217100
           K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                      ++e++ Lk+ei+ Lq+ +R + G + e ++l eL  Le++Le  + +iRs K+++++++i+ l++ke  l+ +nk+L+  +ee
  XP_022719823.1  89 AKKEIDMLKQEIQILQKGLRYMFGGGSEIMTLDELLVLEKHLEIWIYHIRSAKMDIMFQEIQMLRNKEGILKAANKYLQDTIEE 172
                     589****************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MARGRVQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGVLIFSA HGKLYELATK  60
GTVQELIERY NKYNGGNQPA EVIVEPMDAK KEIDMLKQEI QILQKGLRYM FGGGSEIMTL  120
DELLVLEKHL EIWIYHIRSA KMDIMFQEIQ MLRNKEGILK AANKYLQDTI EENIGNTDFT  180
TITTNMPHPL TIANNIIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.18e-79MIKC_MADS family protein