PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719833.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 219aa MW: 23953.7 Da PI: 8.1581

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	144.4	3.4e-45	8	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +Ca+Ck+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasn++kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ XP_022719833.1 8 PCAGCKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNITKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLS 102 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_022719833.1 103 CAKSE 107 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MASSSNSPCA GCKFLRRKCQ PECVFAPYFP PDQPQKFANV HKVFGASNIT KLLNELHPSQ 60 REDAVNSLAY EADMRLRDPV YGCVGVISLL QHQLRQLQMD LSCAKSELSK YQSLGITGHA 120 GLIAAAAAAA TTTATTHQNL GTNLFGSEVG GGRDHHYHHQ FFPRDHHQQQ QRMIRSFDGG 180 SNYDASLPAT NVSAGIGQLN QYQQQRAAAG DDRRSIDPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	6e-91	LBD family protein