PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719834.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 318aa MW: 35623.7 Da PI: 8.3756

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	1e-16	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Edell+ ++k+ G g+W+t +++ g+ R++k+c++rw +yl XP_022719834.1 33 RGPWTPDEDELLATYIKKEGEGRWRTLPKRAGLFRCGKSCRLRWMNYL 80 89********************************************97 PP
2	Myb_DNA-binding	47	5.9e-15	91	131	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_022719834.1 91 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 131 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MRNPATATAT TTTTTRNSKG SKTPCCSKVG LKRGPWTPDE DELLATYIKK EGEGRWRTLP 60 KRAGLFRCGK SCRLRWMNYL RPSVKRGQIA PDEEDLILRL HRLLGNRWSL IAGRIPGRTD 120 NEIKNYWNTH LSKKLISQGI DPRTHKPLNP QHSPTHLKAS SSSIPNPGAT IPNPNISNPA 180 SSSLEHARRG QVMADKENEY FQNHYQSDDV AIGHGFTSLL NCDASGIEMR NNQSQGISNE 240 EDEDINYCTD DIFSSFLNSL INEDAFTNQN QLQQQQINGI SQADTLIAST LSLSQGWESP 300 IISSNFNQDP KRLNDHLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	6e-83	MYB family protein