PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719945.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 385aa MW: 42291.1 Da PI: 8.0849

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.6e-17	118	163	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++ XP_022719945.1 118 RGHWRPVEDAKLKELVAQYGPQNWNLIAEHLE-GRSGKSCRLRWFNQ 163 899***************************.*********996 PP
2	Myb_DNA-binding	53.9	4.1e-17	170	213	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ a +++G++ W+ Iar ++ gRt++ +k++w+ XP_022719945.1 170 RKAFTEEEEERLLAARRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 213 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MSPQNLNNDF NCYTGVVQEM NFLALPALFS HPTERYTTNS QMGFQISSSL MEQSNKCLGF 60 EPLESRGTKR AAACDGKNGF LGVEKRGLSL NLVGENESNK SSASAGGNKN EHTKLCARGH 120 WRPVEDAKLK ELVAQYGPQN WNLIAEHLEG RSGKSCRLRW FNQLDPRINR KAFTEEEEER 180 LLAARRLYGN KWAMIARLFP GRTDNAVKNH WHVIMARKHR EQSSIYRRRK PSSSASQALP 240 KGLDVTAQNN ACSDQSTISS NIDESASTCT DLSLTPLSTK VPPEFVTSLS PVHQMGSSGE 300 KVMTRGNGDF DKFYGTGNVF YHQGPMGVVM GVDQSAHSSD SNSEVSAAES VGTNRTNHSM 360 SGESGNGNEN INNMPFIDFL GVGAS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MSPQNLNNDF NCYTGVVQEM NFLALPALFS HPTERYTTNS QMGFQISSSL MEQSNKCLGF  60
EPLESRGTKR AAACDGKNGF LGVEKRGLSL NLVGENESNK SSASAGGNKN EHTKLCARGH  120
WRPVEDAKLK ELVAQYGPQN WNLIAEHLEG RSGKSCRLRW FNQLDPRINR KAFTEEEEER  180
LLAARRLYGN KWAMIARLFP GRTDNAVKNH WHVIMARKHR EQSSIYRRRK PSSSASQALP  240
KGLDVTAQNN ACSDQSTISS NIDESASTCT DLSLTPLSTK VPPEFVTSLS PVHQMGSSGE  300
KVMTRGNGDF DKFYGTGNVF YHQGPMGVVM GVDQSAHSSD SNSEVSAAES VGTNRTNHSM  360
SGESGNGNEN INNMPFIDFL GVGAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17800.1	5e-64	MYB family protein