PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022719972.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 671aa    MW: 74691.2 Da    PI: 6.3538
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022719972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS430.91e-1312896561374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lL++c+ea+ s++ +++++++a+l +lasp+g++++Rlaay+teALa r++r +++++++  p+e + +  +++ aal+l+++vsPi+kf h
  XP_022719972.1 289 LVHLLTACVEAIGSKNIAAINHFIAKLGDLASPRGNAINRLAAYYTEALALRVTRLWPHIFHITIPRELD-RVDDDNGAALRLLNQVSPIPKFVH 382
                     68************************************************************99999997.5678888999************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +t N+ +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR ++p ++R+Tg+g+    sk++l+etg+rLa fAe+l++pfef++ v++rled++
  XP_022719972.1 383 FTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRINPPSHVRVTGIGE----SKQQLNETGDRLAGFAEALNLPFEFHP-VVDRLEDVR 472
                     ******************************************************....9**************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l++L+vk++E++aVn+v+qlh++l  ++++    +++L l++s++P+vv+++eqea+hn  s+ +r++++l++ysa+fds++++lp es  rik+
  XP_022719972.1 473 LWMLHVKEKESVAVNCVFQLHKTL-YDGNVGA-LRDFLGLIRSTNPTVVIMAEQEAEHNVLSLEARVTNSLSHYSAIFDSIDSSLPLESPVRIKI 565
                     ***********************9.4555555.689*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374
                     E + ++rei+n++aceg++r+erhe++ekWr+ +e+ GF+ + ++e++  q ++ll++++sd y+v+   ++ g+l+l W d+pL+svSaW+
  XP_022719972.1 566 EDM-FAREIRNIIACEGSDRFERHESFEKWRQLMEQGGFRCMGITERELLQSQMLLKMYSSDNYSVKkqgQDGGALTLSWLDQPLYSVSAWT 656
                     ***.***************************************************************5555588999**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    
MLAGCSSSTL LSPRHRLRRE ASAQFQACHF QTSMSTQRLD LPCGFSRKDT SRSQPIRPVG  60
LSVEKPIESK NSGCSLKRNI RLPPLTTSAQ NPFEGRRENK DVFWEKGKSL KRFAEQGLID  120
ESVIRRAKRK KGSSDNDNSG DILEGGGDNS SLGQLGAGTF WFQPSFTGQN APQVPFSLTC  180
SGDEERVCFV PGEVISPPLP LSKIPWIESV ITEITDFGEK DVETIRRPEK EASGTSTSSD  240
NHSLGLRLKE QTTEHEGGNG SENPYPHEGA GSVGVYEENN HGEHQGFELV HLLTACVEAI  300
GSKNIAAINH FIAKLGDLAS PRGNAINRLA AYYTEALALR VTRLWPHIFH ITIPRELDRV  360
DDDNGAALRL LNQVSPIPKF VHFTSNEILL RAFEGKDRVH IIDFDIKQGL QWPSLFQSLA  420
SRINPPSHVR VTGIGESKQQ LNETGDRLAG FAEALNLPFE FHPVVDRLED VRLWMLHVKE  480
KESVAVNCVF QLHKTLYDGN VGALRDFLGL IRSTNPTVVI MAEQEAEHNV LSLEARVTNS  540
LSHYSAIFDS IDSSLPLESP VRIKIEDMFA REIRNIIACE GSDRFERHES FEKWRQLMEQ  600
GGFRCMGITE RELLQSQMLL KMYSSDNYSV KKQGQDGGAL TLSWLDQPLY SVSAWTPIDV  660
AGSSSSFSQP I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein