PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022720026.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 244aa    MW: 27796 Da    PI: 10.1493
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022720026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF55.38.1e-181150342
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    i n+s r+ t+ kR++g++KK +ELS+LC++e++ ii+s+
  XP_022720026.1 11 ITNDSARKATYKKRKKGLMKKVSELSTLCGIEACAIIYSP 50
                    89*************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MTRKKVKLAY ITNDSARKAT YKKRKKGLMK KVSELSTLCG IEACAIIYSP YESQPEVWPS  60
PVGVQRVLSE FKKLPEMEQS KKMVNQESFL RQRIAKANEQ LKKQCKDNRE KEMTQVLFQN  120
LTGKGLHNLN MMDLNDLGWL IEQNLKDINK RVDTLTKASH SQGSAAASSA TMVTPEAKPK  180
RGEKVQAGRS GIEANMDTMQ RQQWIMDLMN PQDHVGFGGN EMMLPFGDNN HNALWSNAFF  240
PWEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAYITNDSARKATYKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.14e-62M-type_MADS family protein