PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720027.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 444aa MW: 50191 Da PI: 8.5805

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_022720027.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	44.4	3.9e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022720027.1 67 RGAFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVENDNKANL RTSNNNNEKT SVGSNELNLY EVMDSKLPSI VVKNYPLEVS 180 SNSNLNNTGN SKNNNVNVTS NPHTQDFLLD RFATTPESNT TTYCRPSDLL GYFPFQKLDY 240 APNIGQSMSQ STSLCFNPSS SCSEMISNFN FSLRQTVSPT MSSSIFQTPI RVKPSVSLPY 300 DNPSRDAKGV RNWEESCYSN NMSSSNGSSS SLKLQSNTTF FESNLFSWEP PDCGKSGQGV 360 QIRSLEGDPD DIKWSEYLNT PLFLGTVMQY QSSQAMYNEV KPQLHLTDRS SNTWPQNQHQ 420 QASRVSDIYA KDFQRLAVAF GQTL

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPNTHKPLS EVENDNKANL RTSNNNNEKT SVGSNELNLY EVMDSKLPSI VVKNYPLEVS  180
SNSNLNNTGN SKNNNVNVTS NPHTQDFLLD RFATTPESNT TTYCRPSDLL GYFPFQKLDY  240
APNIGQSMSQ STSLCFNPSS SCSEMISNFN FSLRQTVSPT MSSSIFQTPI RVKPSVSLPY  300
DNPSRDAKGV RNWEESCYSN NMSSSNGSSS SLKLQSNTTF FESNLFSWEP PDCGKSGQGV  360
QIRSLEGDPD DIKWSEYLNT PLFLGTVMQY QSSQAMYNEV KPQLHLTDRS SNTWPQNQHQ  420
QASRVSDIYA KDFQRLAVAF GQTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-122	MYB family protein