PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720072.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 433aa MW: 48233.2 Da PI: 7.2776

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	60	114	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_022720072.1 60 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 114 79****************************************************8 PP
2	Myb_DNA-binding	65.7	8.3e-21	62	113	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022720072.1 62 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 113 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MLNLHLSSFW RQKMYHHQHQ HQGKNIHPSS RMSIPPERHL FLKGGNGPGD SGLVLSTDAK 60 PRLKWTPDLH ERFIEAVNQL GGADKATPKT VMKLMGIPGL TLYHLKSHLQ KYRLSKNLHG 120 QANNGSNKIG AVAMAGDRMP EGNGTHMNNL SIGPQTNKGI QIGEALQMQI EVQRKLHEQL 180 EVQRHLQLRI EAQGKYLQAV LEKAQETLGR QNLGTVGLEA AKVQLSELVS KVSNQCLNSA 240 FSDLKDLQGL CPQQTQAIPP TDCSMDSCLT SCEGSQKEQE IHNNGMCLRP YNSSSLLEQR 300 DQIAEDPLLP QNGLKPFEDI KESKMFLSSI GIDAERRMFF ADRSSSDLSI SVGFQGEKGH 360 GSNNNNNNSS SNFSERNFEG RNEEDSFLDQ GNKRAETVNR LPYFPTKLDL NVHDENDAAS 420 SCKQFDLNGL SWS

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MLNLHLSSFW RQKMYHHQHQ HQGKNIHPSS RMSIPPERHL FLKGGNGPGD SGLVLSTDAK  60
PRLKWTPDLH ERFIEAVNQL GGADKATPKT VMKLMGIPGL TLYHLKSHLQ KYRLSKNLHG  120
QANNGSNKIG AVAMAGDRMP EGNGTHMNNL SIGPQTNKGI QIGEALQMQI EVQRKLHEQL  180
EVQRHLQLRI EAQGKYLQAV LEKAQETLGR QNLGTVGLEA AKVQLSELVS KVSNQCLNSA  240
FSDLKDLQGL CPQQTQAIPP TDCSMDSCLT SCEGSQKEQE IHNNGMCLRP YNSSSLLEQR  300
DQIAEDPLLP QNGLKPFEDI KESKMFLSSI GIDAERRMFF ADRSSSDLSI SVGFQGEKGH  360
GSNNNNNNSS SNFSERNFEG RNEEDSFLDQ GNKRAETVNR LPYFPTKLDL NVHDENDAAS  420
SCKQFDLNGL SWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-162	G2-like family protein