PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720073.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 421aa MW: 46719.3 Da PI: 6.9535

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.8e-34	47	101	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_022720073.1 47 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 101 79****************************************************8 PP
2	Myb_DNA-binding	65.8	8e-21	49	100	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022720073.1 49 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 100 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MYHHQHQHQG KNIHPSSRMS IPPERHLFLK GGNGPGDSGL VLSTDAKPRL KWTPDLHERF 60 IEAVNQLGGA DKATPKTVMK LMGIPGLTLY HLKSHLQKYR LSKNLHGQAN NGSNKIGAVA 120 MAGDRMPEGN GTHMNNLSIG PQTNKGIQIG EALQMQIEVQ RKLHEQLEQV QRHLQLRIEA 180 QGKYLQAVLE KAQETLGRQN LGTVGLEAAK VQLSELVSKV SNQCLNSAFS DLKDLQGLCP 240 QQTQAIPPTD CSMDSCLTSC EGSQKEQEIH NNGMCLRPYN SSSLLEQRDQ IAEDPLLPQN 300 GLKPFEDIKE SKMFLSSIGI DAERRMFFAD RSSSDLSISV GFQGEKGHGS NNNNNNSSSN 360 FSERNFEGRN EEDSFLDQGN KRAETVNRLP YFPTKLDLNV HDENDAASSC KQFDLNGLSW 420 S

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MYHHQHQHQG KNIHPSSRMS IPPERHLFLK GGNGPGDSGL VLSTDAKPRL KWTPDLHERF  60
IEAVNQLGGA DKATPKTVMK LMGIPGLTLY HLKSHLQKYR LSKNLHGQAN NGSNKIGAVA  120
MAGDRMPEGN GTHMNNLSIG PQTNKGIQIG EALQMQIEVQ RKLHEQLEQV QRHLQLRIEA  180
QGKYLQAVLE KAQETLGRQN LGTVGLEAAK VQLSELVSKV SNQCLNSAFS DLKDLQGLCP  240
QQTQAIPPTD CSMDSCLTSC EGSQKEQEIH NNGMCLRPYN SSSLLEQRDQ IAEDPLLPQN  300
GLKPFEDIKE SKMFLSSIGI DAERRMFFAD RSSSDLSISV GFQGEKGHGS NNNNNNSSSN  360
FSERNFEGRN EEDSFLDQGN KRAETVNRLP YFPTKLDLNV HDENDAASSC KQFDLNGLSW  420
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-160	G2-like family protein