PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022720164.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 466aa    MW: 53372 Da    PI: 7.2266
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022720164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS307.82.5e-94804642374
            GRAS   2 velLlecAeavssgdle.laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     ++lLl  ++ v+++++e  a + L +l +++s  gd++qR++ayf+ +Laarl+   s  y+ +  ++t+    +ee+ a++ ++ vsP+++f+h
  XP_022720164.1  80 IHLLLITVTSVDENNNEnSALENLIQLYQNVSLMGDSVQRVVAYFADGLAARLLTRKSPFYDMIMKEPTT----EEEFLAFTCLYRVSPYYQFAH 170
                     67888778888776555499***********************************9*****999888886....78889999************* PP

            GRAS  96 ltaNqaIleavegeerv.....HiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlv 182
                     +taNqaI ea+e+ee++     H+iDfd+s+G+QWp+L+q+L++++  ++  slR+Tg g+    s +el+et+ rL +fA+ + ++ fef+ l 
  XP_022720164.1 171 FTANQAIIEAFEKEEEInngalHVIDFDVSYGFQWPSLIQSLSEKAssGNRMSLRLTGYGR----SLDELQETEARLVSFAKGFrNLVFEFQGL- 260
                     **************66555556**********************99755677*********....9****************9758*******8. PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        l   ++++Lr k++E++aVnlv++l +l  + + ++    ++Lk v sl+P +v++veqe +++  sFl rf+e+l+y++a+fdsl+  lp 
  XP_022720164.1 261 ---LRGSKVNNLRKKKNETVAVNLVFHLNTLN-NFLRIS----DTLKSVHSLRPSIVILVEQEGSRSPRSFLSRFMESLHYFAAMFDSLDDCLPL 347
                     ...778889*******************9996.445555....5*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerre.......rhetlekWrerleeaGFkpvplsekaakqaklllr........kvk...sdgyrveee 354
                     es er ++E+  lg++i++++ c  +e +e       r e++e+W++r+e+ GF+ ++ls+k   qaklll+        +++   + g+rv e+
  XP_022720164.1 348 ESAERLSIEKNHLGKQIKSMINCCDKEDQEnkksscpRYEKMETWKSRMESNGFEGMKLSSKCLIQAKLLLKirthycrlQCEgenNGGFRVFER 442
                     *********************9977765553344455789******************************9733222222111111234666544 PP

            GRAS 355 .sgslv.lgWkdrpLvsvSaWr 374
                      +g ++ lgW+dr L+++SaW+
  XP_022720164.1 443 dEGKALsLGWQDRCLLTASAWQ 464
                     4444445**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MEDTDEKELL NLSLAIVTDP GGEKNNRKRK RFVNVCKDLN PSYEGSEGKI FKLLQVREEM  60
LKLDHKRKGV VEDGKGLHLI HLLLITVTSV DENNNENSAL ENLIQLYQNV SLMGDSVQRV  120
VAYFADGLAA RLLTRKSPFY DMIMKEPTTE EEFLAFTCLY RVSPYYQFAH FTANQAIIEA  180
FEKEEEINNG ALHVIDFDVS YGFQWPSLIQ SLSEKASSGN RMSLRLTGYG RSLDELQETE  240
ARLVSFAKGF RNLVFEFQGL LRGSKVNNLR KKKNETVAVN LVFHLNTLNN FLRISDTLKS  300
VHSLRPSIVI LVEQEGSRSP RSFLSRFMES LHYFAAMFDS LDDCLPLESA ERLSIEKNHL  360
GKQIKSMINC CDKEDQENKK SSCPRYEKME TWKSRMESNG FEGMKLSSKC LIQAKLLLKI  420
RTHYCRLQCE GENNGGFRVF ERDEGKALSL GWQDRCLLTA SAWQCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04890.15e-51GRAS family protein