PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720240.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 901aa MW: 99727.1 Da PI: 6.5462

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.2	3.7e-24	127	228	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++lt +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_022720240.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELTARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217 99***************************8544444..49********************************************..889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_022720240.1 218 KNQLLLGIRRA 228 9999**997 PP
2	Auxin_resp	118.8	4.3e-39	253	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS Wrs+k XP_022720240.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPMAKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSYWRSVK 336 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 901 aa Download sequence
MRLSSAGFNP QTQEGEKRVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE 60 VDAQIPNYPS LPPQLICQLH NVTMHADIET DEVYAQMTLQ PLSPQEQKET YLPAELGSPN 120 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELTAR DLHDNEWKFR 180 HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL 240 SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPM AKYIKAVYHT RVSVGMRFRM 300 LFETEESSVR RYMGTITGIS DLDPVRWPNS YWRSVKVGWD ESTAGERQPR VSLWEIEPLT 360 TFPMYTSPFS LRLKRPWPPG LPSFNGIKDD DLGMSSPLMW LRGDADRGMH SLNFQGIGVT 420 PWMQPRLDAS MLGLQPDVYQ AMAAAALQEM RAVEPSKPAT ASLLQFQQPQ NFPSRPAALI 480 QPQTLQQSQP RGFLQGVEDN QHQAQLKAQV QTQPHVLQQQ LHHENLFNNQ QQHQQQLQHP 540 LSQQHQQLVD HQQISSAVSA MSQYASASQS KSSPLQAIPS LCQQHSFSDS NGNPVTSPIV 600 SPLHSLLGSF PQDESSNLLN RSNPVITSVG WPSKRAAVDV LSSGSPQCIL PQVEQLGTPR 660 TNMSQNSISL PPFPGRECSI DQDGGSDPQS HLLFGVNIEP SSLLMQNGMS SLRGVGSDSD 720 STTIPFSSNY TSTAGTDFSV NPVMTPSSCI DESGFLQSPE NVCQGNPQTY VKVYKSGSFG 780 RSLDISKFSS YNELRGELAR MFGLEGQLED PPRSGWQLVF VDRENDILLL GDDPWPEFVN 840 SVWCIKILSP PEVQQMGKRG LELLSSVPVQ RLSNGSCDDY VSRQDSRNLS SGIATVGSLD 900 Y

Sequence ? help Back to Top

Protein Sequence Length: 901 aa Download sequence

MRLSSAGFNP QTQEGEKRVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE  60
VDAQIPNYPS LPPQLICQLH NVTMHADIET DEVYAQMTLQ PLSPQEQKET YLPAELGSPN  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELTAR DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPM AKYIKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS YWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYTSPFS LRLKRPWPPG LPSFNGIKDD DLGMSSPLMW LRGDADRGMH SLNFQGIGVT  420
PWMQPRLDAS MLGLQPDVYQ AMAAAALQEM RAVEPSKPAT ASLLQFQQPQ NFPSRPAALI  480
QPQTLQQSQP RGFLQGVEDN QHQAQLKAQV QTQPHVLQQQ LHHENLFNNQ QQHQQQLQHP  540
LSQQHQQLVD HQQISSAVSA MSQYASASQS KSSPLQAIPS LCQQHSFSDS NGNPVTSPIV  600
SPLHSLLGSF PQDESSNLLN RSNPVITSVG WPSKRAAVDV LSSGSPQCIL PQVEQLGTPR  660
TNMSQNSISL PPFPGRECSI DQDGGSDPQS HLLFGVNIEP SSLLMQNGMS SLRGVGSDSD  720
STTIPFSSNY TSTAGTDFSV NPVMTPSSCI DESGFLQSPE NVCQGNPQTY VKVYKSGSFG  780
RSLDISKFSS YNELRGELAR MFGLEGQLED PPRSGWQLVF VDRENDILLL GDDPWPEFVN  840
SVWCIKILSP PEVQQMGKRG LELLSSVPVQ RLSNGSCDDY VSRQDSRNLS SGIATVGSLD  900
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein