PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720721.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 571aa MW: 64221.5 Da PI: 6.9325

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.4e-11	108	149	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W ++++ ll+++++++G g+W+ +a+++g +++ + c++++ + XP_022720721.1 108 WNADDEMLLLEGIEMYGLGNWAEVAEHVG-TKSKEKCIDHYSN 149 ***************************.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MGRSRGNFHS ADEDPTQRSR RKKNASAGEN LESSTSVQGT SEGKRALFHC NYCNKDITGK 60 IRIKCAICPD FDLCIECFSV GAEVTPHKSN HSYRVMDNLC YPLICPDWNA DDEMLLLEGI 120 EMYGLGNWAE VAEHVGTKSK EKCIDHYSNV YMKSPFFPLP DMSHVVGKNR KELLAMAKGH 180 AEDKKGSSML GELPVKEESP FSPSRVKVEG GSSGRLLSAL NTDVESGVRS SSSSTASAAV 240 KKVSNMAQVK DGNVKMEDPQ IDRNFGGKKP NSLGNDGPSL VELSGYNPKR QEFDPEYDND 300 AEQLLAEMEF KDTDTEEERE LKLRVLRIYS KRLDERKRRK DFILERNLLY PNPFEKNLSP 360 EERALCRRYD VFMRFHSKEE HDELLETVIA EHRTLKRIEE LKEAQVAGCR TSAEADRYLE 420 QKRKREAEES SQRAKDGVQG GPSGHGGPNS FMASESVGKE SNSRPIAQAS SSNANDLDIM 480 GFSETQLLSE TVRTLFRTDR FSSDLKLKEK RLCGEIRLPP PLYLRMLQII SEEIFNGNVT 540 KKADARGLFK MEASKIDRVY DMLVKKGIAP A

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MGRSRGNFHS ADEDPTQRSR RKKNASAGEN LESSTSVQGT SEGKRALFHC NYCNKDITGK  60
IRIKCAICPD FDLCIECFSV GAEVTPHKSN HSYRVMDNLC YPLICPDWNA DDEMLLLEGI  120
EMYGLGNWAE VAEHVGTKSK EKCIDHYSNV YMKSPFFPLP DMSHVVGKNR KELLAMAKGH  180
AEDKKGSSML GELPVKEESP FSPSRVKVEG GSSGRLLSAL NTDVESGVRS SSSSTASAAV  240
KKVSNMAQVK DGNVKMEDPQ IDRNFGGKKP NSLGNDGPSL VELSGYNPKR QEFDPEYDND  300
AEQLLAEMEF KDTDTEEERE LKLRVLRIYS KRLDERKRRK DFILERNLLY PNPFEKNLSP  360
EERALCRRYD VFMRFHSKEE HDELLETVIA EHRTLKRIEE LKEAQVAGCR TSAEADRYLE  420
QKRKREAEES SQRAKDGVQG GPSGHGGPNS FMASESVGKE SNSRPIAQAS SSNANDLDIM  480
GFSETQLLSE TVRTLFRTDR FSSDLKLKEK RLCGEIRLPP PLYLRMLQII SEEIFNGNVT  540
KKADARGLFK MEASKIDRVY DMLVKKGIAP A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	336	341	RKRRKD