PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720798.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 259aa MW: 29620 Da PI: 5.5352

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	132.6	1.6e-41	15	114	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkCa+dC+lapyfp++++++f+n+hklFG+sn++k++kal++ e+++am+++v++++ara+dPv G++++i++lq+q+e ++ael+ XP_022720798.1 15 ACAACKYQRRKCAPDCILAPYFPHDRQRQFQNAHKLFGVSNISKIIKALNPPEKDIAMRTIVFQSDARANDPVGGCYRIIQELQRQIEYSQAELD 109 7*********************************************************************************************9 PP DUF260 96 llkee 100 l+ ++ XP_022720798.1 110 LVFHQ 114 98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MGINPRSGSN GTTQACAACK YQRRKCAPDC ILAPYFPHDR QRQFQNAHKL FGVSNISKII 60 KALNPPEKDI AMRTIVFQSD ARANDPVGGC YRIIQELQRQ IEYSQAELDL VFHQLAICRA 120 QAAHQQQQQQ LQTSHLQMQE PAAGDSTLGC EMVNPDPLTT YNSNYYYVQE PLDEQFTVND 180 NNVHHHMQEN YDSWDIQEST TALSSLNIKQ SFIKEGDNDY NNEVKPDHGI PCERHEIKFE 240 TEELVERRFV PSTQLVMSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	2e-66	LBD family protein