PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720829.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 733aa MW: 80053.7 Da PI: 7.5655

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.6	1.3e-24	157	258	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + + + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++ XP_022720829.1 157 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyNRQ-RPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGED 248 99**************************97333.44679********************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_022720829.1 249 GELRLGIRRA 258 99***996 PP
2	Auxin_resp	127.8	6.7e-42	283	364	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 ++ha+s+ksvF+++YnPras+seF+++v+k+ k+l++++svGmRfkm+feted++err++G+v+g+sd+dpvrWp+SkWr+L XP_022720829.1 283 VIHAISMKSVFSICYNPRASSSEFIIPVHKFWKSLNHSFSVGMRFKMRFETEDAAERRYTGLVTGISDMDPVRWPGSKWRCL 364 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MAGLIDLNTT EENETASSGS LSPSSSSASV LSASGAPGSG SSSSSSVCLE LWHACAGPLI 60 SLPKRGSVVV YFPQGHLEQL SDFSGVAAAY DLPPHVFCRV VDIKLHAEAG TDEVYAQVSL 120 VPESEQIGQK SPKEKIEADG EEEDVEADIK STIPHMFCKT LTASDTSTHG GFSVPRRAAE 180 DCFPPLDYNR QRPSQELVAK DLHGLEWKFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA 240 VLFLRGEDGE LRLGIRRAAQ IKSRISFPSL YSLQLNCSTF ADVIHAISMK SVFSICYNPR 300 ASSSEFIIPV HKFWKSLNHS FSVGMRFKMR FETEDAAERR YTGLVTGISD MDPVRWPGSK 360 WRCLLVSWDD IDANRHSRVS PWEIEPSGLI SSTNSLLSPG SKRNRVGLPS GKPEFMISDG 420 IGASDFGESL RFQKVLQGQE IMGLNTLYDG ANCQNMHRSE TRQCFPGSNV SGIAAIGNVS 480 RNTLMNPDIF YEGVGFGKSF RFHKVLQGQE IFVSPPYRRG PTAAVTNNSR DFPDTGQLSG 540 TSNRWSSLMQ GYNTNSHIRP SVQVSSPSSV LTFQQTSNSI PNFNRIYNFN SQEKEHPETY 600 GGKLLPSSTS EHGSCVRDQG SLNSFGQSND SVQLGASQPL AAQPTFRTSQ NLASACKSSC 660 RLFGFSLTEG RHDATTEKNM VQPTSSLSSG AFLPSIGEQL HPKPPAVTNS VGSNCTKISN 720 LYAVRDIPFD IAL

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MAGLIDLNTT EENETASSGS LSPSSSSASV LSASGAPGSG SSSSSSVCLE LWHACAGPLI  60
SLPKRGSVVV YFPQGHLEQL SDFSGVAAAY DLPPHVFCRV VDIKLHAEAG TDEVYAQVSL  120
VPESEQIGQK SPKEKIEADG EEEDVEADIK STIPHMFCKT LTASDTSTHG GFSVPRRAAE  180
DCFPPLDYNR QRPSQELVAK DLHGLEWKFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA  240
VLFLRGEDGE LRLGIRRAAQ IKSRISFPSL YSLQLNCSTF ADVIHAISMK SVFSICYNPR  300
ASSSEFIIPV HKFWKSLNHS FSVGMRFKMR FETEDAAERR YTGLVTGISD MDPVRWPGSK  360
WRCLLVSWDD IDANRHSRVS PWEIEPSGLI SSTNSLLSPG SKRNRVGLPS GKPEFMISDG  420
IGASDFGESL RFQKVLQGQE IMGLNTLYDG ANCQNMHRSE TRQCFPGSNV SGIAAIGNVS  480
RNTLMNPDIF YEGVGFGKSF RFHKVLQGQE IFVSPPYRRG PTAAVTNNSR DFPDTGQLSG  540
TSNRWSSLMQ GYNTNSHIRP SVQVSSPSSV LTFQQTSNSI PNFNRIYNFN SQEKEHPETY  600
GGKLLPSSTS EHGSCVRDQG SLNSFGQSND SVQLGASQPL AAQPTFRTSQ NLASACKSSC  660
RLFGFSLTEG RHDATTEKNM VQPTSSLSSG AFLPSIGEQL HPKPPAVTNS VGSNCTKISN  720
LYAVRDIPFD IAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein