PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720833.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 392aa MW: 43899.9 Da PI: 9.5777

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.2	4.7e-11	43	86	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +ErrRR+++ +++ Lr+++P + ++Ka+i e A+ YI++Lq XP_022720833.1 43 HAERRRRQKLSDRLLSLRSIVPII-----TNMNKATIIEDAITYIQELQ 86 79*******************6.....58***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MEFVGSDMTG ISITDHRGPS RGRMGRRRID DDENKEFKSK NLHAERRRRQ KLSDRLLSLR 60 SIVPIITNMN KATIIEDAIT YIQELQKTSE VLSGQLLQME GSSEEEGKPI RIEIDAAEDP 120 KKCGIKEEVK VTNIDGNKLL IKIILEKKRG CFTKLIEAMN YLGFELSETN VTTFKGAMRI 180 SSCVQGIYGD TLMVEQTEKL LLEIIRSIRD YCLNCEIKTN HPGDRGGQSY GTQLVRSPQN 240 IPSRTPPPLK KILYKDHKIN RQSRNSPTFL LSIYMTNPGF MARAKVLPPH LSFMARFRHL 300 GIILAAECFS FIVKFQATNG SRIISPEAGI DADTLQVEMI AEGPVIRAIG KHYSSDKSAA 360 GGDVILGGFV MAVVVAVVCY LRITRRSLEA HT

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MEFVGSDMTG ISITDHRGPS RGRMGRRRID DDENKEFKSK NLHAERRRRQ KLSDRLLSLR  60
SIVPIITNMN KATIIEDAIT YIQELQKTSE VLSGQLLQME GSSEEEGKPI RIEIDAAEDP  120
KKCGIKEEVK VTNIDGNKLL IKIILEKKRG CFTKLIEAMN YLGFELSETN VTTFKGAMRI  180
SSCVQGIYGD TLMVEQTEKL LLEIIRSIRD YCLNCEIKTN HPGDRGGQSY GTQLVRSPQN  240
IPSRTPPPLK KILYKDHKIN RQSRNSPTFL LSIYMTNPGF MARAKVLPPH LSFMARFRHL  300
GIILAAECFS FIVKFQATNG SRIISPEAGI DADTLQVEMI AEGPVIRAIG KHYSSDKSAA  360
GGDVILGGFV MAVVVAVVCY LRITRRSLEA HT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	26	51	RRRIDDDENKEFKSKNLHAERRRRQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21330.1	2e-36	bHLH family protein