PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720911.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YA

Protein Properties

Length: 347aa MW: 37912.3 Da PI: 9.1554

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	102.6	3.7e-32	187	243	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep+YVNaKQy++Il+RR+ Rakle+++k+ +k rkpylheSRh hAl+R+Rg+gGrF XP_022720911.1 187 DEPVYVNAKQYHAILRRREYRAKLEAQNKV-IKIRKPYLHESRHLHALKRARGNGGRF 243 79**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MQNWHEKDSS ISSHSTGTYV VGCSSWGNST ESRVQQSSMS ESLSLKMGVL PQHFHNTKQL 60 GFQFQDQDSS STQSTGQSYP EVASAGVGNL YGQSLISASS GGNGTHGKLG GGYAKLAFTM 120 GTQDNAFPSS QVDYSKSIAH VPLHFAEPYF GSVMGAAYPP QAMQIHHAHM MGILPARVPL 180 PLDLTEDEPV YVNAKQYHAI LRRREYRAKL EAQNKVIKIR KPYLHESRHL HALKRARGNG 240 GRFLNTKKLQ ESKHIPTSHD LDVSRSPPQL HLSANISKSE VHQLENYKGA ASTTSCSDVT 300 SASYNDERFQ QPDFRFSVYP SHIGGAMVGH AGVMHGGGNL HHLSGLC

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MQNWHEKDSS ISSHSTGTYV VGCSSWGNST ESRVQQSSMS ESLSLKMGVL PQHFHNTKQL  60
GFQFQDQDSS STQSTGQSYP EVASAGVGNL YGQSLISASS GGNGTHGKLG GGYAKLAFTM  120
GTQDNAFPSS QVDYSKSIAH VPLHFAEPYF GSVMGAAYPP QAMQIHHAHM MGILPARVPL  180
PLDLTEDEPV YVNAKQYHAI LRRREYRAKL EAQNKVIKIR KPYLHESRHL HALKRARGNG  240
GRFLNTKKLQ ESKHIPTSHD LDVSRSPPQL HLSANISKSE VHQLENYKGA ASTTSCSDVT  300
SASYNDERFQ QPDFRFSVYP SHIGGAMVGH AGVMHGGGNL HHLSGLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72830.1	3e-70	NF-YA family protein